Detailed information of evm.model.Ap1.3276 in Astrangia poculata

Genomic Location: Ap1:33492288...33507511
NR annotation: XP_020612293.1, laminin subunit gamma-1-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0JP86Laminin subunit gamma-1 OS=Xenopus tropicalis OX=8364 GN=lamc1 PE=2 SV=1
P15800Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1
A4D0S4Laminin subunit beta-4 OS=Homo sapiens OX=9606 GN=LAMB4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan
PF21199LAMININ_IV_BLaminin IV type B domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049DomainLaminin-type EGF domainInterproscan
IPR000034DomainLaminin IVInterproscan
IPR013015DomainLaminin IV type BInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005604Cellular Componentbasement membraneInterproscan
GO:0008045Biological Processmotor neuron axon guidanceInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan
GO:0016358Biological Processdendrite developmentInterproscan

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