Detailed information of evm.model.Ap1.3688 in Astrangia poculata

Genomic Location: Ap1:38050397...38057411
NR annotation: XP_020606154.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P06206C-reactive protein 1.4 OS=Limulus polyphemus OX=6850 PE=1 SV=3
Q62443Neuronal pentraxin-1 OS=Mus musculus OX=10090 GN=Nptx1 PE=1 SV=1
P47971Neuronal pentraxin-1 OS=Rattus norvegicus OX=10116 GN=Nptx1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00024PAN_1PAN domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR051360FamilyNeuronal Pentraxin and RelatedInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19277PENTRAXINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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