Detailed information of evm.model.Ap1.3947 in Astrangia poculata

Genomic Location: Ap1:40392459...40398102
NR annotation: XP_015754659.1, PREDICTED: TNF receptor-associated factor 5-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q557K0TNF receptor-associated factor family protein DDB_G0273433/DDB_G0273509 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0273433 PE=3 SV=1
Q9BZY9E3 ubiquitin-protein ligase TRIM31 OS=Homo sapiens OX=9606 GN=TRIM31 PE=1 SV=2
Q86XT4E3 ubiquitin-protein ligase TRIM50 OS=Homo sapiens OX=9606 GN=TRIM50 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15227zf-C3HC4_4zinc finger of C3HC4-type, RINGDomainInterproscan
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan

TOP