Detailed information of evm.model.Ap10.1021.1.5f15dd58 in Astrangia poculata

Genomic Location: Ap10:10800658...10850781
NR annotation: XP_020622225.1, LOW QUALITY PROTEIN: uncharacterized protein LOC110059840 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y5G1Protocadherin gamma-B3 OS=Homo sapiens OX=9606 GN=PCDHGB3 PE=1 SV=4
Q5DRA9Protocadherin gamma-B2 OS=Pan troglodytes OX=9598 GN=PCDHGB2 PE=3 SV=1
Q5DRA8Protocadherin gamma-B4 OS=Pan troglodytes OX=9598 GN=PCDHGB4 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR051830FamilyNeurogenic locus notch homologInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24033EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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