Detailed information of evm.model.Ap10.1560 in Astrangia poculata

Genomic Location: Ap10:15407962...15417970
NR annotation: XP_020600443.1, low-density lipoprotein receptor-related protein 4-like isoform X2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P16109P-selectin OS=Homo sapiens OX=9606 GN=SELP PE=1 SV=4
O88572Low-density lipoprotein receptor-related protein 6 OS=Mus musculus OX=10090 GN=Lrp6 PE=1 SV=1
O75581Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens OX=9606 GN=LRP6 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF00531DeathDeath domainDomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050778FamilyCueball/EGF/LRP/NidogenInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR000488DomainDeath domainInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46513VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0017147Molecular FunctionWnt-protein bindingInterproscan
GO:0042813Molecular FunctionWnt receptor activityInterproscan
GO:0060070Biological Processcanonical Wnt signaling pathwayInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

TOP