Gene detail

Detailed information of evm.model.Ap10.1711 in Astrangia poculata

Genomic Location: Ap10:17190352...17200401
NR annotation: XP_020603798.1, low-density lipoprotein receptor-related protein 6-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P98164	Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens OX=9606 GN=LRP2 PE=1 SV=3
C0HL13	Low-density lipoprotein receptor-related protein 2 OS=Sus scrofa OX=9823 GN=LRP2 PE=1 SV=1
P98106	P-selectin OS=Rattus norvegicus OX=10116 GN=Selp PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00084	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF00058	Ldl_recept_b	Low-density lipoprotein receptor repeat class B	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR050778	Family	Cueball/EGF/LRP/Nidogen	Interproscan
IPR000033	Repeat	LDLR class B repeat	Interproscan
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46513	VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-