Detailed information of evm.model.Ap10.1802 in Astrangia poculata

Genomic Location: Ap10:18301553...18308048
NR annotation: XP_020600548.1, U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96G21U3 small nucleolar ribonucleoprotein protein IMP4 OS=Homo sapiens OX=9606 GN=IMP4 PE=1 SV=1
Q5R947U3 small nucleolar ribonucleoprotein protein IMP4 OS=Pongo abelii OX=9601 GN=IMP4 PE=2 SV=2
Q8VHZ7U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus musculus OX=10090 GN=Imp4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04427BrixBrix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007109DomainBrix domainInterproscan
IPR044281FamilyU3 snoRNP protein/Ribosome production factor 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034457Cellular ComponentMpp10 complexInterproscan
GO:0042134Molecular FunctionrRNA primary transcript bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14561IMP4; U3 small nucleolar ribonucleoprotein protein IMP4-Ribosome biogenesisko03009deepkoala

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