Detailed information of evm.model.Ap10.1978 in Astrangia poculata

Genomic Location: Ap10:20107330...20131535
NR annotation: RMX52094.1, hypothetical protein pdam_00019065 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
B3EWZ3Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF00652Ricin_B_lectinRicin-type beta-trefoil lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR035992Homologous_superfamilyRicin B-like lectinsInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR000772DomainRicin B, lectin domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP