Detailed information of evm.model.Ap10.1987 in Astrangia poculata

Genomic Location: Ap10:20316857...20333299
NR annotation: CAH3164520.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BMN8Tyrosine-protein phosphatase Lar-like OS=Caenorhabditis elegans OX=6239 GN=ptp-3 PE=1 SV=1
P28685Contactin-2 OS=Gallus gallus OX=9031 GN=CNTN2 PE=1 SV=1
Q28178Thrombospondin-1 OS=Bos taurus OX=9913 GN=THBS1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000082DomainSEA domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45888HL01030P-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0042800Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

TOP