Detailed information of evm.model.Ap10.2015 in Astrangia poculata

Genomic Location: Ap10:20627367...20648215
NR annotation: KAJ7370748.1, hypothetical protein OS493_030177 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M9NDE3Protein bark beetle OS=Drosophila melanogaster OX=7227 GN=bark PE=1 SV=1
Q8K299Scavenger receptor class A member 5 OS=Mus musculus OX=10090 GN=Scara5 PE=1 SV=1
Q2VLG6Scavenger receptor cysteine-rich type 1 protein M130 OS=Canis lupus familiaris OX=9615 GN=CD163 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001190DomainSRCR domainInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan

TOP