Detailed information of evm.model.Ap10.2023 in Astrangia poculata

Genomic Location: Ap10:20736543...20755076
NR annotation: XP_020606021.1, protein bark beetle-like isoform X2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M9NDE3Protein bark beetle OS=Drosophila melanogaster OX=7227 GN=bark PE=1 SV=1
Q2VLH6Scavenger receptor cysteine-rich type 1 protein M130 OS=Mus musculus OX=10090 GN=Cd163 PE=1 SV=2
Q60754Macrophage receptor MARCO OS=Mus musculus OX=10090 GN=Marco PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR016054DomainLy-6 antigen/uPA receptor-likeInterproscan
IPR001190DomainSRCR domainInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan
IPR045860Homologous_superfamilySnake toxin-like superfamilyInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan

TOP