Detailed information of evm.model.Ap10.683 in Astrangia poculata

Genomic Location: Ap10:7254405...7290490
NR annotation: CAH3047119.1, unnamed protein product, partial [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5GFL6von Willebrand factor A domain-containing protein 2 OS=Homo sapiens OX=9606 GN=VWA2 PE=1 SV=1
A6NMZ7Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2
Q8NFW1Collagen alpha-1(XXII) chain OS=Homo sapiens OX=9606 GN=COL22A1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24049CRUMBS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007157Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0032991Cellular Componentprotein-containing complexInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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