Detailed information of evm.model.Ap11.1088 in Astrangia poculata

Genomic Location: Ap11:12167781...12185185
NR annotation: XP_020605847.1, cartilage intermediate layer protein 1-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10591SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding regionDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR019577DomainSPARC/Testican, calcium-binding domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR039675FamilyCartilage intermediate layer protein 1/2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15031CARTILAGE INTERMEDIATE LAYER PROTEIN CLIPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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