Detailed information of evm.model.Ap11.1095 in Astrangia poculata

Genomic Location: Ap11:12249841...12259354
NR annotation: XP_020607236.1, malignant fibrous histiocytoma-amplified sequence 1 homolog [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0IIG7Ras-related protein Rab-5A OS=Bos taurus OX=9913 GN=RAB5A PE=1 SV=1
P18066Ras-related protein Rab-5A OS=Canis lupus familiaris OX=9615 GN=RAB5A PE=1 SV=1
P20339Ras-related protein Rab-5A OS=Homo sapiens OX=9606 GN=RAB5A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16095CORC-terminal of Roc, COR, domainFamilyInterproscan
PF00531DeathDeath domainDomainInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032171DomainC-terminal of Roc (COR) domainInterproscan
IPR000488DomainDeath domainInterproscan
IPR020859DomainRoc domainInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050715FamilyLeucine-rich repeat and signaling effector domain-containing proteinInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45752LEUCINE-RICH REPEAT-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

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