Detailed information of evm.model.Ap11.1435 in Astrangia poculata

Genomic Location: Ap11:15691474...15704025
NR annotation: XP_022793108.1, next to BRCA1 gene 1 protein-like isoform X1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5RC94Next to BRCA1 gene 1 protein OS=Pongo abelii OX=9601 GN=NBR1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD|PB1
Ubiquitin FamilyUBD|Alpha-Helix|UBA

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16158N_BRCA1_IGIg-like domain from next to BRCA1 geneDomainInterproscan
PF00564PB1PB1 domainDomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032350DomainNext to BRCA1, central domainInterproscan
IPR000270DomainPB1 domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20930OVARIAN CARCINOMA ANTIGEN CA125-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17987NBR1; next to BRCA1 gene 1 protein-Mitochondrial biogenesisko03029deepkoala

TOP