Detailed information of evm.model.Ap11.159_evm.model.Ap11.139_evm.model.Ap11.140_evm.model.Ap11.148 in Astrangia poculata

Genomic Location: Ap11:1866616...2004213
NR annotation: CAH3022032.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P0CG68Polyubiquitin-C OS=Sus scrofa OX=9823 GN=UBC PE=2 SV=1
P0CG66Polyubiquitin-C OS=Gorilla gorilla gorilla OX=9595 GN=UBC PE=3 SV=1
P62976Polyubiquitin OS=Cricetulus griseus OX=10029 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF20694TRADD-like_NTRADD-like N-terminal domainDomainInterproscan
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR050158FamilyUbiquitin and ubiquitin-likeInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR049341DomainTRADD-like N-terminal domainInterproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan
IPR019956DomainUbiquitin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10666UBIQUITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019941Biological Processmodification-dependent protein catabolic processInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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