Detailed information of evm.model.Ap11.1884 in Astrangia poculata

Genomic Location: Ap11:20852102...20853127
NR annotation: XP_020632135.1, parapinopsin-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O42266Parapinopsin OS=Ictalurus punctatus OX=7998 PE=2 SV=1
Q2KNE5Melanopsin-A OS=Danio rerio OX=7955 GN=opn4a PE=2 SV=3
O15974Rhodopsin, G0-coupled OS=Mizuhopecten yessoensis OX=6573 GN=SCOP2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027430Binding_siteVisual pigments (opsins) retinal binding siteInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR002962FamilyPeropsinInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24240OPSINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007601Biological Processvisual perceptionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan

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