Detailed information of evm.model.Ap11.242 in Astrangia poculata

Genomic Location: Ap11:3088940...3112886
NR annotation: XP_020600649.1, uncharacterized protein LOC110039840 isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9QZQ0Neuronal PAS domain-containing protein 3 OS=Mus musculus OX=10090 GN=Npas3 PE=1 SV=1
Q8IXF0Neuronal PAS domain-containing protein 3 OS=Homo sapiens OX=9606 GN=NPAS3 PE=1 SV=1
Q99742Neuronal PAS domain-containing protein 1 OS=Homo sapiens OX=9606 GN=NPAS1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00989PASPAS foldDomainInterproscan
PF14598PAS_11PAS domainDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR000014DomainPAS domainInterproscan
IPR013767DomainPAS foldInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR001610RepeatPAC motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23043HYPOXIA-INDUCIBLE FACTOR 1 ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

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