Detailed information of evm.model.Ap11.254 in Astrangia poculata

Genomic Location: Ap11:3239793...3241964
NR annotation: CAH3161655.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6PFY8E3 ubiquitin-protein ligase TRIM45 OS=Mus musculus OX=10090 GN=Trim45 PE=1 SV=2
Q9U489Protein lin-41 OS=Caenorhabditis elegans OX=6239 GN=lin-41 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF17170DUF51286-bladed beta-propellerRepeatInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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