Detailed information of evm.model.Ap11.314 in Astrangia poculata

Genomic Location: Ap11:3887819...3902428
NR annotation: CAH3022032.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P0CG68Polyubiquitin-C OS=Sus scrofa OX=9823 GN=UBC PE=2 SV=1
P0CG50Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2
P0CG78Polyubiquitin-F OS=Dictyostelium discoideum OX=44689 GN=ubqF PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20694TRADD-like_NTRADD-like N-terminal domainDomainInterproscan
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR019956DomainUbiquitin domainInterproscan
IPR049341DomainTRADD-like N-terminal domainInterproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan
IPR050158FamilyUbiquitin and ubiquitin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10666UBIQUITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019941Biological Processmodification-dependent protein catabolic processInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

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