Detailed information of evm.model.Ap11.335 in Astrangia poculata

Genomic Location: Ap11:4045181...4051695
NR annotation: XP_056253721.1, LOW QUALITY PROTEIN: polyubiquitin-B [Seriola aureovittata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P0CG71Polyubiquitin-A OS=Caenorhabditis elegans OX=6239 GN=ubq-1 PE=3 SV=1
Q63429Polyubiquitin-C OS=Rattus norvegicus OX=10116 GN=Ubc PE=1 SV=1
P0CG64Polyubiquitin-C OS=Pan troglodytes OX=9598 GN=UBC PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019954Conserved_siteUbiquitin conserved siteInterproscan
IPR050158FamilyUbiquitin and ubiquitin-likeInterproscan
IPR019956DomainUbiquitin domainInterproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10666UBIQUITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019941Biological Processmodification-dependent protein catabolic processInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

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