Detailed information of evm.model.Ap11.351 in Astrangia poculata

Genomic Location: Ap11:4223513...4229388
NR annotation: XP_020616797.1, uncharacterized protein LOC110054780 isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P0CG67Polyubiquitin-B OS=Gorilla gorilla gorilla OX=9595 GN=UBB PE=3 SV=1
P0CG47Polyubiquitin-B OS=Homo sapiens OX=9606 GN=UBB PE=1 SV=1
P0CG65Polyubiquitin-B OS=Pan troglodytes OX=9598 GN=UBB PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20694TRADD-like_NTRADD-like N-terminal domainDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049341DomainTRADD-like N-terminal domainInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR050158FamilyUbiquitin and ubiquitin-likeInterproscan
IPR019956DomainUbiquitin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10666UBIQUITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019941Biological Processmodification-dependent protein catabolic processInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

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