Detailed information of evm.model.Ap12.1821_evm.model.Ap12.1830 in Astrangia poculata

Genomic Location: Ap12:19202303...19228321
NR annotation: XP_020612627.1, E3 ubiquitin-protein ligase TRIM33-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q64127Transcription intermediary factor 1-alpha OS=Mus musculus OX=10090 GN=Trim24 PE=1 SV=1
Q6E2N3E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio OX=7955 GN=trim33 PE=2 SV=1
O15164Transcription intermediary factor 1-alpha OS=Homo sapiens OX=9606 GN=TRIM24 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00439BromodomainBromodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001487DomainBromodomainInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR001965DomainZinc finger, PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

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