Gene detail

Detailed information of evm.model.Ap12.1856 in Astrangia poculata

Genomic Location: Ap12:19523385...19524638
NR annotation: CAH3107496.1, unnamed protein product, partial [Porites lobata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A2XED8	Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1
Q941W1	Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1
Q9FGH2	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 OS=Arabidopsis thaliana OX=3702 GN=LSH5 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00589	Phage_integrase	Phage integrase family	Family	Interproscan
PF04852	ALOG_dom	ALOG domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006936	Domain	ALOG domain	Interproscan
IPR002104	Domain	Integrase, catalytic domain	Interproscan
IPR040222	Family	ALOG family	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31165	PROTEIN G1-LIKE2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0009299	Biological Process	mRNA transcription	Interproscan