Detailed information of evm.model.Ap12.2117 in Astrangia poculata

Genomic Location: Ap12:22201303...22207045
NR annotation: KAJ7382984.1, hypothetical protein OS493_031486 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6R5N8Toll-like receptor 13 OS=Mus musculus OX=10090 GN=Tlr13 PE=1 SV=1
V5NAL9Toll-like receptor 4 OS=Pinctada imbricata OX=66713 PE=2 SV=1
O60602Toll-like receptor 5 OS=Homo sapiens OX=9606 GN=TLR5 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF13676TIR_2TIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000157DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR035897Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR017241FamilyToll-like receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24365TOLL-LIKE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007165Biological Processsignal transductionInterproscan
GO:0002224Biological Processtoll-like receptor signaling pathwayInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006954Biological Processinflammatory responseInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan

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