Detailed information of evm.model.Ap12.377 in Astrangia poculata

Genomic Location: Ap12:3608879...3665458
NR annotation: XP_020613303.1, fibrocystin-L-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86WI1Fibrocystin-L OS=Homo sapiens OX=9606 GN=PKHD1L1 PE=1 SV=2
Q80ZA4Fibrocystin-L OS=Mus musculus OX=10090 GN=Pkhd1l1 PE=1 SV=1
E2RK30Fibrocystin OS=Canis lupus familiaris OX=9615 GN=PKHD1 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01833TIGIPT/TIG domainDomainInterproscan
PF10162G8G8 domainDomainInterproscan
PF07691PA14PA14 domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR002909DomainIPT domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR011658DomainPA14 domainInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR019316DomainG8 domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR052387FamilyFibrocystin-related proteinInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR008972Homologous_superfamilyCupredoxinInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR036439Homologous_superfamilyDockerin domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46769POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0000272Biological Processpolysaccharide catabolic processInterproscan

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