Detailed information of evm.model.Ap13.1131 in Astrangia poculata

Genomic Location: Ap13:11654386...11671902
NR annotation: XP_020627678.1, protein transport protein Sec23A-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2VDL8Protein transport protein Sec23A OS=Bos taurus OX=9913 GN=SEC23A PE=2 SV=1
Q15436Protein transport protein Sec23A OS=Homo sapiens OX=9606 GN=SEC23A PE=1 SV=2
Q5R9P3Protein transport protein Sec23A OS=Pongo abelii OX=9601 GN=SEC23A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08033Sec23_BSSec23/Sec24 beta-sandwich domainDomainInterproscan
PF04815Sec23_helicalSec23/Sec24 helical domainDomainInterproscan
PF04810zf-Sec23_Sec24Sec23/Sec24 zinc fingerDomainInterproscan
PF04811Sec23_trunkSec23/Sec24 trunk domainDomainInterproscan
PF00626GelsolinGelsolin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037550DomainSec23, C-terminalInterproscan
IPR036180Homologous_superfamilyGelsolin-like domain superfamilyInterproscan
IPR012990DomainSec23/Sec24 beta-sandwichInterproscan
IPR029006Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR006900DomainSec23/Sec24, helical domainInterproscan
IPR006895DomainZinc finger, Sec23/Sec24-typeInterproscan
IPR036175Homologous_superfamilySec23/Sec24 helical domain superfamilyInterproscan
IPR006896DomainSec23/Sec24, trunk domainInterproscan
IPR036174Homologous_superfamilyZinc finger, Sec23/Sec24-type superfamilyInterproscan
IPR037364FamilyProtein transport protein Sec23Interproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR007123DomainGelsolin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11141PROTEIN TRANSPORT PROTEIN SEC23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030127Cellular ComponentCOPII vesicle coatInterproscan
GO:0090114Biological ProcessCOPII-coated vesicle buddingInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0070971Cellular Componentendoplasmic reticulum exit siteInterproscan
GO:0090110Biological ProcessCOPII-coated vesicle cargo loadingInterproscan

TOP