Detailed information of evm.model.Ap13.1503 in Astrangia poculata

Genomic Location: Ap13:16021888...16034723
NR annotation: XP_020632712.1, endoplasmic reticulum membrane-associated RNA degradation protein-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5T6L9Endoplasmic reticulum membrane-associated RNA degradation protein OS=Homo sapiens OX=9606 GN=ERMARD PE=1 SV=1
Q3B8R1Endoplasmic reticulum membrane-associated RNA degradation protein OS=Rattus norvegicus OX=10116 GN=Ermard PE=2 SV=2
Q4R6F2Endoplasmic reticulum membrane-associated RNA degradation protein (Fragment) OS=Macaca fascicularis OX=9541 GN=ERMARD PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan

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