Gene detail

Detailed information of evm.model.Ap13.1519 in Astrangia poculata

Genomic Location: Ap13:16207660...16208730
NR annotation: XP_020603722.1, mRNA decay activator protein ZFP36L1-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q07352	mRNA decay activator protein ZFP36L1 OS=Homo sapiens OX=9606 GN=ZFP36L1 PE=1 SV=1
P23950	mRNA decay activator protein ZFP36L1 OS=Mus musculus OX=10090 GN=Zfp36l1 PE=1 SV=1
P17431	mRNA decay activator protein ZFP36L1 OS=Rattus norvegicus OX=10116 GN=Zfp36l1 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-CCCH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00642	zf-CCCH	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	Family	Interproscan
PF04553	Tis11B_N	Tis11B like protein, N terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR036855	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan
IPR045877	Family	RNA-binding protein ZFP36-like	Interproscan
IPR007635	Domain	Tis11B-like protein, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18753	ZFP36L; butyrate response factor	-	Messenger RNA biogenesis	ko03019	deepkoala