Detailed information of evm.model.Ap13.1816 in Astrangia poculata

Genomic Location: Ap13:19431759...19441094
NR annotation: XP_020608487.1, uncharacterized protein LOC110047095 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZQU0Sushi, nidogen and EGF-like domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Sned1 PE=2 SV=2
Q70E20Sushi, nidogen and EGF-like domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sned1 PE=2 SV=2
O08523Alpha-tectorin OS=Mus musculus OX=10090 GN=Tecta PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF06119NIDONidogen-likeFamilyInterproscan
PF00431CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR003886DomainNIDO domainInterproscan
IPR000859DomainCUB domainInterproscan
IPR051495FamilyEpithelial Barrier and Cell Signaling ProteinInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13802MUCIN 4-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan

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