Detailed information of evm.model.Ap13.222 in Astrangia poculata

Genomic Location: Ap13:2492036...2495662
NR annotation: KAJ7384927.1, positive regulation of MHC class I biosynthetic process [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y239Nucleotide-binding oligomerization domain-containing protein 1 OS=Homo sapiens OX=9606 GN=NOD1 PE=1 SV=1
Q8K3Z0Nucleotide-binding oligomerization domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nod2 PE=1 SV=1
Q8R4B8NACHT, LRR and PYD domains-containing protein 3 OS=Mus musculus OX=10090 GN=Nlrp3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF05729NACHTNACHT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR051261FamilyNOD-like receptor (NLR)Interproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR038359Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP