Detailed information of evm.model.Ap13.2277 in Astrangia poculata

Genomic Location: Ap13:24296092...24309111
NR annotation: XP_020604197.1, digestive organ expansion factor homolog [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q642T7U3 small nucleolar RNA-associated protein 25 homolog OS=Xenopus tropicalis OX=8364 GN=utp25 PE=2 SV=1
Q8BTT6U3 small nucleolar RNA-associated protein 25 homolog OS=Mus musculus OX=10090 GN=Utp25 PE=1 SV=2
Q5ZLG3U3 small nucleolar RNA-associated protein 25 homolog OS=Gallus gallus OX=9031 GN=UTP25 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06862UTP25Utp25, U3 small nucleolar RNA-associated SSU processome protein 25FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010678FamilyU3 small nucleolar RNA-associated protein 25Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12933ORF PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14774UTP25, DEF; U3 small nucleolar RNA-associated protein 25-Ribosome biogenesisko03009deepkoala

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