Detailed information of evm.model.Ap13.2472 in Astrangia poculata

Genomic Location: Ap13:26402519...26430528
NR annotation: XP_027043247.1, splicing factor 3B subunit 2-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3UJB0Splicing factor 3B subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1
Q13435Splicing factor 3B subunit 2 OS=Homo sapiens OX=9606 GN=SF3B2 PE=1 SV=2
Q9UUI3Pre-mRNA-splicing factor sap145 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sap145 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04046PSPPSPFamilyInterproscan
PF02037SAPSAP domainDomainInterproscan
PF04037DUF382Domain of unknown function (DUF382) FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003034DomainSAP domainInterproscan
IPR006568DomainPSP, proline-richInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR007180DomainDomain of unknown function DUF382Interproscan
IPR052584FamilyPre-mRNA Spliceosomal U2 snRNP Complex ComponentInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12785SPLICING FACTOR 3BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12829SF3B2, SAP145, CUS1; splicing factor 3B subunit 2-Spliceosomeko03041deepkoala

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