Gene detail

Detailed information of evm.model.Ap13.2752 in Astrangia poculata

Genomic Location: Ap13:29070294...29075174
NR annotation: XP_020612135.1, TNF receptor-associated factor 4-like [Orbicella faveolata]

Gene Structure

Sequence

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|ZnF\|ZnF_A20

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01754	zf-A20	A20-like zinc finger	Family	Interproscan
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002653	Domain	Zinc finger, A20-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR018957	Domain	Zinc finger, C3HC4 RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0033209	Biological Process	tumor necrosis factor-mediated signaling pathway	Interproscan
GO:0070534	Biological Process	protein K63-linked ubiquitination	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan