Detailed information of evm.model.Ap13.2847 in Astrangia poculata

Genomic Location: Ap13:30198236...30202044
NR annotation: KAJ7357484.1, hypothetical protein OS493_025000 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O13065Matrix metalloproteinase-18 OS=Xenopus laevis OX=8355 GN=mmp18 PE=2 SV=1
P23097Collagenase 3 (Fragment) OS=Rattus norvegicus OX=10116 GN=Mmp13 PE=1 SV=1
O77656Collagenase 3 OS=Bos taurus OX=9913 GN=MMP13 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00045HemopexinHemopexinRepeatInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021190FamilyPeptidase M10AInterproscan
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR018486Conserved_siteHemopexin, conserved siteInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR000585DomainHemopexin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

TOP