Detailed information of evm.model.Ap13.3179 in Astrangia poculata

Genomic Location: Ap13:33483844...33501627
NR annotation: CAH3128961.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A2CG63AT-rich interactive domain-containing protein 4B OS=Mus musculus OX=10090 GN=Arid4b PE=1 SV=1
P29374AT-rich interactive domain-containing protein 4A OS=Homo sapiens OX=9606 GN=ARID4A PE=1 SV=3
Q4LE39AT-rich interactive domain-containing protein 4B OS=Homo sapiens OX=9606 GN=ARID4B PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyARID

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08169RBB1NTRBB1NT (NUC162) domainDomainInterproscan
PF11717Tudor-knotRNA binding activity-knot of a chromodomain FamilyInterproscan
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR012603DomainARID4A/B, PWWP domainInterproscan
IPR051232FamilyAT-rich Interactive Domain/SWI1 Chromatin RemodelingInterproscan
IPR002999DomainTudor domainInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR001606DomainARID DNA-binding domainInterproscan
IPR025995DomainRNA binding activity-knot of a chromodomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13964RBP-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

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