Gene detail

Detailed information of evm.model.Ap13.333 in Astrangia poculata

Genomic Location: Ap13:3452476...3455471
NR annotation: XP_020618380.1, uncharacterized protein LOC110056261 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9ERB4	Versican core protein (Fragments) OS=Rattus norvegicus OX=10116 GN=Vcan PE=2 SV=2
Q62059	Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=2
Q4PRC9	Snaclec 4 OS=Daboia siamensis OX=343250 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001304	Domain	C-type lectin-like	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0038023	Molecular Function	signaling receptor activity	Interproscan