Gene detail

Detailed information of evm.model.Ap13.796 in Astrangia poculata

Genomic Location: Ap13:8143332...8147679
NR annotation: CAH3183130.1, unnamed protein product [Porites evermanni]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P41891	Protein gar2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gar2 PE=1 SV=2
Q43349	29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP29A PE=2 SV=2
P51968	Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis OX=8355 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR050886	Family	RNA-binding_regulatory_proteins	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48024	GEO13361P1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25095	SLIRP; SRA stem-loop-interacting RNA-binding protein, mitochondrial	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala