Gene detail

Detailed information of evm.model.Ap14.1300 in Astrangia poculata

Genomic Location: Ap14:13957699...13967006
NR annotation: XP_020629759.1, uncharacterized protein LOC110066850 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9CR50	RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rchy1 PE=1 SV=1
Q96PM5	RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RCHY1 PE=1 SV=1
Q10LI1	E3 ubiquitin-protein ligase SRFP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SRFP1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF14599	zinc_ribbon_6	Zinc-ribbon	Domain	Interproscan
PF05495	zf-CHY	CHY zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR037275	Homologous_superfamily	Zinc finger, CTCHY-type superfamily	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR017921	Domain	Zinc finger, CTCHY-type	Interproscan
IPR039512	Domain	RCHY1, zinc-ribbon	Interproscan
IPR008913	Domain	Zinc finger, CHY-type	Interproscan
IPR037274	Homologous_superfamily	Zinc finger, CHY-type superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21319	RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan