Detailed information of evm.model.Ap14.1312 in Astrangia poculata

Genomic Location: Ap14:14144722...14147345
NR annotation: CAH3128026.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P59807Chondroitin sulfate ABC endolyase OS=Proteus vulgaris OX=585 PE=1 SV=2
C5G6D7Chondroitin sulfate ABC exolyase OS=Bacteroides thetaiotaomicron OX=818 GN=chonabc PE=1 SV=2
Q8A2I1Chondroitin sulfate ABC exolyase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=chonabc PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02278Lyase_8Polysaccharide lyase family 8, super-sandwich domainFamilyInterproscan
PF09093Lyase_catalytLyase, catalyticRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR008929Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan
IPR003159DomainPolysaccharide lyase family 8, central domainInterproscan
IPR011071Homologous_superfamilyPolysaccharide lyase family 8-like, C-terminalInterproscan
IPR015177DomainLyase, catalyticInterproscan
IPR039174FamilyChondroitin sulfate ABC lyaseInterproscan
IPR014718Homologous_superfamilyGlycoside hydrolase-type carbohydrate-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37322-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0006027Biological Processglycosaminoglycan catabolic processInterproscan

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