Gene detail

Detailed information of evm.model.Ap2.1016 in Astrangia poculata

Genomic Location: Ap2:10302525...10305093
NR annotation: CAB4012588.1, Retrovirus-related Pol poly from transposon [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P27401	Pro-Pol polyprotein OS=Simian foamy virus type 3 (strain LK3) OX=11644 GN=pol PE=3 SV=2
O93209	Pro-Pol polyprotein OS=Feline foamy virus OX=53182 GN=pol PE=3 SV=1
Q87040	Pro-Pol polyprotein OS=Simian foamy virus (isolate chimpanzee) OX=298339 GN=pol PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47266	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00164	OGDH, sucA; 2-oxoglutarate dehydrogenase E1 component	EC:1.2.4.2	Lipoic acid metabolism	ko00785	deepkoala