Detailed information of evm.model.Ap2.1631 in Astrangia poculata

Genomic Location: Ap2:17421177...17452639
NR annotation: XP_020610784.1, WD repeat-containing protein 6-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5RB07tRNA (34-2'-O)-methyltransferase regulator WDR6 OS=Pongo abelii OX=9601 GN=WDR6 PE=2 SV=1
Q9NNW5tRNA (34-2'-O)-methyltransferase regulator WDR6 OS=Homo sapiens OX=9606 GN=WDR6 PE=1 SV=1
Q99ME2tRNA (34-2'-O)-methyltransferase regulator WDR6 OS=Mus musculus OX=10090 GN=Wdr6 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168C2C2 domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF14500MMS19_NDos2-interacting transcription regulator of RNA-Pol-IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR037724DomainFerlin, fifth C2 domainInterproscan
IPR000008DomainC2 domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR051973FamilytRNA Anticodon Loop Methyltransferase RegulatorInterproscan
IPR029240DomainMMS19, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14344WD REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan

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