Detailed information of evm.model.Ap2.2256 in Astrangia poculata

Genomic Location: Ap2:24113065...24125929
NR annotation: XP_020629060.1, glutamate receptor ionotropic, NMDA 1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35439Glutamate receptor ionotropic, NMDA 1 OS=Rattus norvegicus OX=10116 GN=Grin1 PE=1 SV=1
Q05586Glutamate receptor ionotropic, NMDA 1 OS=Homo sapiens OX=9606 GN=GRIN1 PE=1 SV=1
P35438Glutamate receptor ionotropic, NMDA 1 OS=Mus musculus OX=10090 GN=Grin1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF10562CaM_bdg_C0Calmodulin-binding domain C0 of NMDA receptor NR1 subunitDomainInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 3DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR018882DomainCalmodulin-binding domain C0, NMDA receptor, NR1 subunitInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR049873DomainGlutamate [NMDA] receptor subunit 1-like, N-terminal LIVBP-like domainInterproscan
IPR049872DomainGlutamate [NMDA] receptor subunit 1-like, ligand-binding domainInterproscan
IPR001638DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan
IPR001508FamilyIonotropic glutamate receptor, metazoaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05208GRIN1; glutamate receptor ionotropic, NMDA 1-Ion channelsko04040deepkoala

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