Detailed information of evm.model.Ap2.2479 in Astrangia poculata

Genomic Location: Ap2:26115734...26119032
NR annotation: XP_020602583.1, tripartite motif-containing protein 2-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1PSW8E3 ubiquitin-protein ligase TRIM71 OS=Mus musculus OX=10090 GN=Trim71 PE=1 SV=1
E7FAM5E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio OX=7955 GN=trim71 PE=1 SV=1
Q1PRL4E3 ubiquitin-protein ligase TRIM71 OS=Gallus gallus OX=9031 GN=TRIM71 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan
PF01436NHLNHL repeatRepeatInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR050952FamilyTripartite Motif and NHL Repeat Containing E3 LigasesInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24104E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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