Detailed information of evm.model.Ap2.2679 in Astrangia poculata

Genomic Location: Ap2:28128452...28131331
NR annotation: XP_020604760.1, methyl-CpG-binding domain protein 4-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9Z2D7Methyl-CpG-binding domain protein 4 OS=Mus musculus OX=10090 GN=Mbd4 PE=1 SV=1
O95243Methyl-CpG-binding domain protein 4 OS=Homo sapiens OX=9606 GN=MBD4 PE=1 SV=1
Q0IGK1Methyl-CpG-binding domain protein 4-like protein OS=Arabidopsis thaliana OX=3702 GN=MBD4L PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyMBD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01429MBDMethyl-CpG binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001739DomainMethyl-CpG DNA bindingInterproscan
IPR045138FamilyMethyl-CpG binding protein MeCP2/MBD4Interproscan
IPR011257Homologous_superfamilyDNA glycosylaseInterproscan
IPR016177Homologous_superfamilyDNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15074METHYL-CPG-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10801MBD4; methyl-CpG-binding domain protein 4EC:3.2.2.-
DNA repair and recombination proteinsko03400deepkoala

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