Detailed information of evm.model.Ap2.2940 in Astrangia poculata

Genomic Location: Ap2:29909863...29960424
NR annotation: XP_027045710.1, cartilage intermediate layer protein 1-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3Z7H8Cartilage intermediate layer protein 2 OS=Mus musculus OX=10090 GN=Cilp2 PE=1 SV=1
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00095WAPWAP-type (Whey Acidic Protein) 'four-disulfide core'DomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF10591SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding regionDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR036645Homologous_superfamilyElafin-like superfamilyInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR008197DomainWAP-type 'four-disulfide core' domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR039675FamilyCartilage intermediate layer protein 1/2Interproscan
IPR002350DomainKazal domainInterproscan
IPR008969Homologous_superfamilyCarboxypeptidase-like, regulatory domain superfamilyInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR019577DomainSPARC/Testican, calcium-binding domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15031CARTILAGE INTERMEDIATE LAYER PROTEIN CLIPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0030414Molecular Functionpeptidase inhibitor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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