Detailed information of evm.model.Ap2.295 in Astrangia poculata

Genomic Location: Ap2:2752266...2753852
NR annotation: KAJ7388316.1, NLR, CARD domain containing 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C3VPR6Protein NLRC5 OS=Mus musculus OX=10090 GN=Nlrc5 PE=1 SV=2
Q8K3Z0Nucleotide-binding oligomerization domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nod2 PE=1 SV=1
G1T469Nucleotide-binding oligomerization domain-containing protein 2 OS=Oryctolagus cuniculus OX=9986 GN=NOD2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038359Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47189MHC CLASS II TRANSACTIVATORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0045345Biological Processpositive regulation of MHC class I biosynthetic processInterproscan
GO:0045348Biological Processpositive regulation of MHC class II biosynthetic processInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

TOP