Detailed information of evm.model.Ap2.3208 in Astrangia poculata

Genomic Location: Ap2:32514808...32530388
NR annotation: XP_020606275.1, coatomer subunit beta-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZIA5Coatomer subunit beta OS=Gallus gallus OX=9031 GN=COPB1 PE=2 SV=1
Q66HV4Coatomer subunit beta OS=Danio rerio OX=7955 GN=copb1 PE=2 SV=1
Q9JIF7Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01602Adaptin_NAdaptin N terminal regionRepeatInterproscan
PF07718Coatamer_beta_CCoatomer beta C-terminal regionDomainInterproscan
PF14806Coatomer_b_CplaCoatomer beta subunit appendage platformDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002553DomainClathrin/coatomer adaptor, adaptin-like, N-terminalInterproscan
IPR016460FamilyCoatomer beta subunit (COPB1)Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR011710DomainCoatomer beta subunit, C-terminalInterproscan
IPR029446DomainCoatomer beta subunit, appendage platform domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10635COATOMER SUBUNIT BETAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030117Cellular Componentmembrane coatInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006891Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0030126Cellular ComponentCOPI vesicle coatInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17301COPB1, SEC26; coatomer subunit beta-Exosomeko04147deepkoala

TOP