Genomic Location: Ap2:39553412...39576855
NR annotation: XP_020615451.1, cold shock domain-containing protein E1-like isoform X2 [Orbicella faveolata]
| CDS | ||||
| evm.model.Ap2.3860 | ||||
| Transcript |
| evm.model.Ap2.3860 |
| Protein |
| evm.model.Ap2.3860 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q91W50 | Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 | |||
| O75534 | Cold shock domain-containing protein E1 OS=Homo sapiens OX=9606 GN=CSDE1 PE=1 SV=2 | |||
| P18395 | Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | CSD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00313 | CSD | 'Cold-shock' DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR002059 | Domain | Cold-shock protein, DNA-binding | Interproscan |
| IPR011129 | Domain | Cold shock domain | Interproscan |
| IPR019844 | Domain | Cold-shock (CSD) domain | Interproscan |
| IPR024642 | Domain | SUZ-C domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12913 | UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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