Detailed information of evm.model.Ap2.3873 in Astrangia poculata

Genomic Location: Ap2:39789174...39795178
NR annotation: XP_044173534.1, uncharacterized protein LOC114947587 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9FGH2Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 OS=Arabidopsis thaliana OX=3702 GN=LSH5 PE=1 SV=1
Q9LW68Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1
A2Y3I2Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04852ALOG_domALOG domainDomainInterproscan
PF09588YqaJYqaJ-like viral recombinase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006936DomainALOG domainInterproscan
IPR019080DomainYqaJ viral recombinaseInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47526ATP-DEPENDENT DNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan

TOP